grasp
v0.4.0b1
Basic Usage
GRASP Console Script
Library (API Documentation)
Table Columns
GRASP Table Query Reference
Indices and tables
grasp
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Index
A
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
L
|
M
|
N
|
P
|
R
|
S
|
U
|
W
A
afr (grasp.ref.PopFlag attribute)
arab (grasp.ref.PopFlag attribute)
C
collapse_dataframe() (in module grasp.query)
columns (grasp.tables.SNP attribute)
,
[1]
(grasp.tables.Study attribute)
,
[1]
config (in module grasp.config)
CONFIG_FILE (in module grasp.config)
D
disc_pops (grasp.tables.Study attribute)
,
[1]
display_columns() (grasp.tables.SNP method)
(grasp.tables.Study method)
display_snp_columns() (in module grasp.info)
display_study_columns() (in module grasp.info)
E
east_asian (grasp.ref.PopFlag attribute)
eur (grasp.ref.PopFlag attribute)
F
filipino (grasp.ref.PopFlag attribute)
G
get_columns() (grasp.tables.SNP method)
(grasp.tables.Study method)
get_phenotype_categories() (in module grasp.info)
get_phenotypes() (in module grasp.info)
get_population_flags() (in module grasp.info)
get_populations() (in module grasp.info)
get_session() (in module grasp.db)
get_snp_columns() (in module grasp.info)
get_snps() (in module grasp.query)
get_studies() (in module grasp.query)
get_study_columns() (in module grasp.info)
get_variant_info() (grasp.tables.SNP method)
(in module grasp.query)
grasp.config (module)
grasp.db (module)
grasp.info (module)
grasp.query (module)
grasp.ref (module)
grasp.tables (module)
H
his (grasp.ref.PopFlag attribute)
hvgs_ids (grasp.tables.SNP attribute)
,
[1]
I
indonesian (grasp.ref.PopFlag attribute)
init_config() (in module grasp.config)
init_config_interactive() (in module grasp.config)
initialize_database() (in module grasp.db)
int (grasp.tables.Phenotype attribute)
,
[1]
(grasp.tables.Platform attribute)
(grasp.tables.Population attribute)
(grasp.tables.SNP attribute)
(grasp.tables.Study attribute)
intersect_overlapping_series() (in module grasp.query)
L
len (grasp.tables.Study attribute)
lookup_location() (in module grasp.query)
lookup_rsid() (in module grasp.query)
lookup_studies() (in module grasp.query)
M
micro (grasp.ref.PopFlag attribute)
mix (grasp.ref.PopFlag attribute)
N
native (grasp.ref.PopFlag attribute)
P
Phenotype (class in grasp.tables)
,
[1]
Platform (class in grasp.tables)
PopFlag (class in grasp.ref)
pops (grasp.tables.Study attribute)
Population (class in grasp.tables)
population_information (grasp.tables.Study attribute)
,
[1]
R
rep_pops (grasp.tables.Study attribute)
,
[1]
S
SNP (class in grasp.tables)
snp_loc (grasp.tables.SNP attribute)
south_asian (grasp.ref.PopFlag attribute)
str (grasp.tables.Phenotype attribute)
,
[1]
(grasp.tables.Platform attribute)
(grasp.tables.Population attribute)
(grasp.tables.SNP attribute)
(grasp.tables.Study attribute)
Study (class in grasp.tables)
U
uns (grasp.ref.PopFlag attribute)
W
write_config() (in module grasp.config)
write_study_dict() (in module grasp.query)
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